IDEAL-GENOM

User Guide

  • Installation Guide
  • Getting Started
  • Configuration Guide
  • Examples

Pipelines

  • Quality Control Pipeline
  • GWAS Pipeline
  • VCF Processing Pipeline

API Reference

  • API Overview

Additional Resources

  • Frequently Asked Questions
  • Troubleshooting Guide
  • Contributing Guide
  • Changelog
IDEAL-GENOM
  • Python Module Index

Python Module Index

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- ideal_genom
    ideal_genom.core.cli
    ideal_genom.core.config
    ideal_genom.core.executor
    ideal_genom.core.get_references
    ideal_genom.core.pipeline
    ideal_genom.core.utils
    ideal_genom.gwas.gen_linear_mix_model
    ideal_genom.gwas.gen_linear_model
    ideal_genom.gwas.preparatory
    ideal_genom.population.projection
    ideal_genom.post_imputation.vcf_process
    ideal_genom.post_imputation.vcf_to_plink
    ideal_genom.utilities.annotations

© Copyright 2026, Luis Giraldo González, Amabel Tenghe.

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